The “Strange Case” of Phenylacetylene: Competition between H-π and n-σ* Contacts, Studied using Matrix Isolation Infrared Spectroscopy and Ab Initio Computations
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IISERM
Abstract
Hydrogen bonded interactions of phenylacetylene (PhAc) with a number of partner
molecules were studied using matrix isolation infrared spectroscopy and ab initio
computations. Phenylacetylene (PhAc) is a multifunctional molecule having an aromatic π
and a non-aromatic π system, and an acidic hydrogen at the acetylenic ≡C-H group, thereby
presenting more than one site to interact with its partner to form a hydrogen bonded complex.
PhAc can be involved in either an n-σ* interaction through the acidic hydrogen or in a H-π
interaction through either of its two π systems. It therefore presents an interesting case of
competitive hydrogen bonding interactions between H-π and n-σ* contacts. We chose
diethylether (DEE), water (H 2 O), methanol (MeOH), formic acid (FA) and HCl, as hydrogen
bonding partners with PhAc to study this competition. On the one hand, DEE presents an
exclusive n-σ* structure, while HCl at the other extreme shows a dominant H-π interaction.
All the other molecules, H 2 O, MeOH and FA, show both n-σ* and H-π structures. This thesis
attempts to understand the competition between the n-σ* and H-π interactions in PhAc, as a
function of the partner molecules.
The hydrogen bonded complexes of PhAc with the above mentioned partners had
interaction energies in the range of -1 to -6 kcal/mol. An important aspect of this work has
been the experimental observation, in a number of cases, of local minima. While cold
molecules studies in the gas phases only identify the global minimum, our experiments using
matrix isolation spectroscopy, has experimentally observed local minima as well, thus
allowing for a better understanding of the potential surface of the complex. The complex
formation was evidenced by the vibrational shifts in the frequencies of the submolecules.
The experiments were corroborated using high level ab initio computations using both DFT
and MP2 methods together with a 6-311++g** and aug-cc-pVDZ basis sets. Interactionenergies of the complexes were also computed using single point calculations at the
CCSD(T) level at the CBS limits. AIM, NBO and LMOEDA calculations were also
performed to understand the nature of interaction in all the complexes.
In the case of PhAc-HCl, it was shown that HCl forms a hydrogen bonded complex
where the hydrogen of HCl was bonded to the π cloud of acetylene. It was further inferred
that the HCl can in fact freely rotate around the triple bond. It was shown that one of the
orientations of HCl, where it was in plane with the phenyl ring, could in fact serve as the
gateway complex for Markovnikov addition.
The complexes of PhAc-H 2 S and PhAc-CO were also studied and the computational
results on the structure, vibrational frequencies and analysis of the weak intermolecular
interactions are presented. However, our experiments on these systems did not yield any
definitive assignments and hence no experimental results have been presented.
As a result of this work, it has become evident that weak secondary C-H ... O
interactions, can play a decisive role in deciding the stability of the hydrogen bonded
structures. Hitherto it has been assumed that the weak interactions, such as C-H...O play only
a supportive role and our work is a paradigm shift in this concept. This thesis has also shown
that some of these interactions can, in fact, be gateway structures for organic reactions.